International Changes in COVID-19 Clinical Trajectories Across 315 Hospitals and 6 Countries: Retrospective Cohort Study

Journals

1. Ta C, Zucker J, Chiu P, Fang Y, Natarajan K, Weng C. Clinical and temporal characterization of COVID-19 subgroups using patient vector embeddings of electronic health records. Journal of the American Medical Informatics Association 2023;30(2):256 View
2. Zhang H, Dagliati A, Shakeri Hossein Abad Z, Xiong X, Bonzel C, Xia Z, Tan B, Avillach P, Brat G, Hong C, Morris M, Visweswaran S, Patel L, Gutiérrez-Sacristán A, Hanauer D, Holmes J, Samayamuthu M, Bourgeois F, L’Yi S, Maidlow S, Moal B, Murphy S, Strasser Z, Neuraz A, Ngiam K, Loh N, Omenn G, Prunotto A, Dalvin L, Klann J, Schubert P, Vidorreta F, Benoit V, Verdy G, Kavuluru R, Estiri H, Luo Y, Malovini A, Tibollo V, Bellazzi R, Cho K, Ho Y, Tan A, Tan B, Gehlenborg N, Lozano-Zahonero S, Jouhet V, Chiovato L, Aronow B, Toh E, Wong W, Pizzimenti S, Wagholikar K, Bucalo M, Cai T, South A, Kohane I, Weber G. International electronic health record-derived post-acute sequelae profiles of COVID-19 patients. npj Digital Medicine 2022;5(1) View
3. Dagliati A, Gatta R, Malovini A, Tibollo V, Sacchi L, Cascini F, Chiovato L, Bellazzi R. A Process Mining Pipeline to Characterize COVID-19 Patients' Trajectories and Identify Relevant Temporal Phenotypes From EHR Data. Frontiers in Public Health 2022;10 View
4. Tan A, Getzen E, Hutch M, Strasser Z, Gutiérrez-Sacristán A, Le T, Dagliati A, Morris M, Hanauer D, Moal B, Bonzel C, Yuan W, Chiudinelli L, Das P, Zhang H, Aronow B, Avillach P, Brat G, Cai T, Hong C, La Cava W, Hooi Will Loh H, Luo Y, Murphy S, Yuan Hgiam K, Omenn G, Patel L, Jebathilagam Samayamuthu M, Shriver E, Shakeri Hossein Abad Z, Tan B, Visweswaran S, Wang X, Weber G, Xia Z, Verdy B, Long Q, Mowery D, Holmes J. Informative missingness: What can we learn from patterns in missing laboratory data in the electronic health record?. Journal of Biomedical Informatics 2023;139:104306 View
5. Cannataro M, Agapito G. Bioinformatics and High-Performance Computing Methods for Deciphering and Fighting COVID-19—Editorial. BioTech 2022;11(4):47 View
6. Klann J, Strasser Z, Hutch M, Kennedy C, Marwaha J, Morris M, Samayamuthu M, Pfaff A, Estiri H, South A, Weber G, Yuan W, Avillach P, Wagholikar K, Luo Y, Omenn G, Visweswaran S, Holmes J, Xia Z, Brat G, Murphy S. Distinguishing Admissions Specifically for COVID-19 From Incidental SARS-CoV-2 Admissions: National Retrospective Electronic Health Record Study. Journal of Medical Internet Research 2022;24(5):e37931 View
7. Murphy S, Visweswaran S, Becich M, Campion T, Knosp B, Melton-Meaux G, Lenert L. Research data warehouse best practices: catalyzing national data sharing through informatics innovation. Journal of the American Medical Informatics Association 2022;29(4):581 View
8. Raj K, Yeruva K, Jyotheeswara Pillai K, Kumar P, Agrawal A, Chandna S, Khuttan A, Tripathi S, Akella R, Gudi T, Watts A, Toquica Gahona C, Bhagat U, Aedma S, Jalal A, Ganti S, Varadarajan P, Pai R. Population Risk Factors for Severe Disease and Mortality in COVID-19 in the United States during the Pre-Vaccine Era: A Retrospective Cohort Study of National Inpatient Sample. Medical Sciences 2022;10(4):67 View
9. Kohane I, Omenn G. Understanding Covid Vaccine Efficacy over Time — Bridging a Gap Between Public Health and Health Care. New England Journal of Medicine 2022;387(6):483 View
10. Zhang H, Honerlaw J, Maripuri M, Samayamuthu M, Beaulieu-Jones B, Baig H, L’Yi S, Ho Y, Morris M, Panickan V, Wang X, Weber G, Liao K, Visweswaran S, Tan B, Yuan W, Gehlenborg N, Muralidhar S, Ramoni R, Aaron J, Agapito G, Albayrak A, Albi G, Alessiani M, Alloni A, Amendola D, Angoulvant F, Anthony L, Aronow B, Ashraf F, Atz A, Avillach P, Azevedo P, Balshi J, Beaulieu-Jones B, Bell D, Bellasi A, Bellazzi R, Benoit V, Beraghi M, Bernal-Sobrino J, Bernaux M, Bey R, Bhatnagar S, Blanco-Martínez A, Bonzel C, Booth J, Bosari S, Bourgeois F, Bradford R, Bréant S, Brown N, Bruno R, Bryant W, Bucalo M, Bucholz E, Burgun A, Cai T, Cannataro M, Carmona A, Caucheteux C, Champ J, Chen J, Chen K, Chiovato L, Chiudinelli L, Cho K, Cimino J, Colicchio T, Cormont S, Cossin S, Craig J, Cruz-Bermúdez J, Cruz-Rojo J, Dagliati A, Daniar M, Daniel C, Das P, Devkota B, Dionne A, Duan R, Dubiel J, DuVall S, Esteve L, Estiri H, Fan S, Follett R, Ganslandt T, García-Barrio N, Garmire L, Getzen E, Geva A, Gradinger T, Gramfort A, Griffier R, Griffon N, Grisel O, Gutiérrez-Sacristán A, Han L, Hanauer D, Haverkamp C, Hazard D, He B, Henderson D, Hilka M, Holmes J, Hong C, Huling K, Hutch M, Issitt R, Jannot A, Jouhet V, Kavuluru R, Keller M, Kennedy C, Key D, Kirchoff K, Klann J, Krantz I, Kraska D, Krishnamurthy A, Le T, Leblanc J, Lemaitre G, Lenert L, Leprovost D, Liu M, Loh N, Long Q, Lozano-Zahonero S, Luo Y, Lynch K, Mahmood S, Maidlow S, Makoudjou A, Malovini A, Mandl K, Mao C, Maram A, Martel P, Martins M, Marwaha J, Masino A, Mazzitelli M, Mensch A, Milano M, Minicucci M, Moal B, Ahooyi T, Moore J, Moraleda C, Morris J, Moshal K, Mousavi S, Mowery D, Murad D, Murphy S, Naughton T, Neto C, Neuraz A, Newburger J, Ngiam K, Njoroge W, Norman J, Obeid J, Okoshi M, Olson K, Omenn G, Orlova N, Ostasiewski B, Palmer N, Paris N, Patel L, Pedrera-Jiménez M, Pfaff E, Pfaff A, Pillion D, Pizzimenti S, Prokosch H, Prudente R, Prunotto A, Quirós-González V, Raskin M, Rieg S, Roig-Domínguez G, Rojo P, Rubio-Mayo P, Sacchi P, Sáez C, Salamanca E, Sanchez-Pinto L, Sandrin A, Santhanam N, Santos J, Vidorreta F, Savino M, Schriver E, Schubert P, Schuettler J, Scudeller L, Sebire N, Serrano-Balazote P, Serre P, Serret-Larmande A, Shah M, Abad Z, Silvio D, Sliz P, Son J, Sonday C, South A, Spiridou A, Strasser Z, Tan A, Tan B, Tanni S, Taylor D, Terriza-Torres A, Tibollo V, Tippmann P, Toh E, Torti C, Trecarichi E, Tseng Y, Vallejos A, Varoquaux G, Vella M, Verdy G, Vie J, Vitacca M, Wagholikar K, Waitman L, Wassermann D, Wolkewitz M, Wong S, Xiong X, Ye Y, Yehya N, Zambelli A, Zhang H, Zöller D, Zuccaro V, Zucco C, Kohane I, Xia Z, Brat G. Potential pitfalls in the use of real-world data for studying long COVID. Nature Medicine 2023;29(5):1040 View
11. Strasser Z, Dagliati A, Shakeri Hossein Abad Z, Klann J, Wagholikar K, Mesa R, Visweswaran S, Morris M, Luo Y, Henderson D, Samayamuthu M, Omenn G, Xia Z, Holmes J, Estiri H, Murphy S, Lai Y. A retrospective cohort analysis leveraging augmented intelligence to characterize long COVID in the electronic health record: A precision medicine framework. PLOS Digital Health 2023;2(7):e0000301 View
12. Hiraga K, Takeuchi M, Kimura T, Yoshida S, Kawakami K. Prediction models for in-hospital deaths of patients with COVID-19 using electronic healthcare data. Current Medical Research and Opinion 2023;39(11):1463 View
13. San Martín-López J, Mesa N, Bernal-Bello D, Morales-Ortega A, Rivilla M, Guerrero M, Calderón R, Farfán A, Rivas L, Soria G, Izquierdo A, Madroñal E, Duarte M, Piedrabuena S, Toledano-Macías M, Marrero J, de Ancos C, Frutos B, Cristóbal R, Velázquez L, Mora B, Cuenca P, Satué J, Ayala-Larrañaga I, Carpintero L, Lara C, Llerena Á, García V, García de Viedma V, Prieto S, González-Pereira N, Bravo C, Mariño C, Lechuga L, Tarancón J, Gonzalo S, Moreno S, Ruiz-Giardin J. Seven Epidemic Waves of COVID-19 in a Hospital in Madrid: Analysis of Severity and Associated Factors. Viruses 2023;15(9):1839 View
14. Abdellatif Z, Abdel-Haleem H, Abdalaziz R, Ramadan A, Al-sharif A, El-Korashy R, Soliman Y, Hussein S, Kamal M, Abdullatif M, AbdelRazik M, Eldessouky N, Atef M. Coronavirus disease 19 (Covid-19): A comparative study of pattern of liver injury in adult patients in different waves of Covid-19 infection. Arab Journal of Gastroenterology 2024;25(2):170 View
15. Hutch M, Son J, Le T, Hong C, Wang X, Shakeri Hossein Abad Z, Morris M, Gutiérrez-Sacristán A, Klann J, Spiridou A, Batugo A, Bellazzi R, Benoit V, Bonzel C, Bryant W, Chiudinelli L, Cho K, Das P, González González T, Hanauer D, Henderson D, Ho Y, Loh N, Makoudjou A, Makwana S, Malovini A, Moal B, Mowery D, Neuraz A, Samayamuthu M, Sanz Vidorreta F, Schriver E, Schubert P, Talbert J, Tan A, Tan B, Tan B, Tibollo V, Tippman P, Verdy G, Yuan W, Avillach P, Gehlenborg N, Omenn G, Visweswaran S, Cai T, Luo Y, Xia Z, Xu J. Neurological diagnoses in hospitalized COVID-19 patients associated with adverse outcomes: A multinational cohort study. PLOS Digital Health 2024;3(4):e0000484 View
16. Jørgensen I, Haue A, Placido D, Hjaltelin J, Brunak S. Disease Trajectories from Healthcare Data: Methodologies, Key Results, and Future Perspectives. Annual Review of Biomedical Data Science 2024;7(1):251 View