Published on in Vol 23 , No 7 (2021) :July

Preprints (earlier versions) of this paper are available at https://preprints.jmir.org/preprint/27633, first published .
Web-Based Survival Analysis Tool Tailored for Medical Research (KMplot): Development and Implementation

Web-Based Survival Analysis Tool Tailored for Medical Research (KMplot): Development and Implementation

Web-Based Survival Analysis Tool Tailored for Medical Research (KMplot): Development and Implementation

Journals

  1. Soares-Lima S, Gonzaga I, Camuzi D, Nicolau-Neto P, Vieira da Silva R, Guaraldi S, Ferreira M, Hernandez-Vargas H, Herceg Z, Ribeiro Pinto L. IL6 and BCL3 Expression Are Potential Biomarkers in Esophageal Squamous Cell Carcinoma. Frontiers in Oncology 2021;11 View
  2. Mikaeili Namini A, Jahangir M, Mohseni M, Kolahi A, Hassanian-Moghaddam H, Mazloumi Z, Motallebi M, Sheikhpour M, Movafagh A. An in silico comparative transcriptome analysis identifying hub lncRNAs and mRNAs in brain metastatic small cell lung cancer (SCLC). Scientific Reports 2022;12(1) View
  3. Nelczyk A, Ma L, Gupta A, Gamage H, McHenry M, Henn M, Kadiri M, Wang Y, Krawczynska N, Bendre S, He S, Shahoei S, Madak-Erdogan Z, Hsiao S, Saleh T, Carpenter V, Gewirtz D, Spinella M, Nelson E. The nuclear receptor TLX (NR2E1) inhibits growth and progression of triple- negative breast cancer. Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease 2022;1868(11):166515 View
  4. Iqbal M, Ahmad N, Mirza Z, Karim S. Gene expression and survival analysis study of KIAA0101 gene revealed its prognostic and diagnostic importance in breast cancer. Vegetos 2023;36(1):249 View
  5. Nishimura T, Takadate T, Maeda S, Suzuki T, Minowa T, Fukuda T, Bando Y, Unno M. Disease-related protein co-expression networks are associated with the prognosis of resectable node-positive pancreatic ductal adenocarcinoma. Scientific Reports 2022;12(1) View
  6. Wei M, Mo Y, Liu J, Zhai J, Li H, Xu Y, Peng Y, Tang Z, Wei T, Yang X, Huang L, Shao X, Li J, Zhou L, Zhong H, Wei C, Xie Q, Min M, Wu F. Ubiquitin ligase RNF125 targets PD-L1 for ubiquitination and degradation. Frontiers in Oncology 2022;12 View
  7. Ucche S, Yokoyama S, Mojic M, Oki K, Ohshima C, Tsuihiji H, Takasaki I, Tahara H, Hayakawa Y. GSTA4 Governs Melanoma Immune Resistance and Metastasis. Molecular Cancer Research 2023;21(1):76 View
  8. Yang Y, Chen C, Zuo Q, Lu H, Salman S, Lyu Y, Huang T, Wicks E, Jackson W, Datan E, Wang R, Wang Y, Le N, Zhu Y, Qin W, Semenza G. NARF is a hypoxia-induced coactivator for OCT4-mediated breast cancer stem cell specification. Science Advances 2022;8(49) View
  9. Ma J, Song P, Liu X, Ma C, Zheng M, Ren X, Wang R, Liu W, Lu Z, Li J. Insights into the roles and driving forces of CCT3 in human tumors. Frontiers in Pharmacology 2022;13 View
  10. Zhang P, Zhao J, Chen L, Bian Z, Ju L, Wang H, Cai W. Expression and function of myelin expression factor 2 in hepatocellular carcinoma. BMC Gastroenterology 2023;23(1) View
  11. Chen X, Han M, Li Y, Li X, Zhang J, Zhu Y. Identification of functional gene modules by integrating multi-omics data and known molecular interactions. Frontiers in Genetics 2023;14 View
  12. Ge Y, Zhang Y, Yang S, Liu T, Zhang T, Feng Y, Wang C, Liang G, Li Y. The Comprehensive Analysis of N6-Methyadenosine Writer METTL3 and METTL14 in Gastric Cancer. Journal of Oncology 2023;2023:1 View
  13. Purazo M, Ice R, Shimpi R, Hoenerhoff M, Pugacheva E. NEDD9 Overexpression Causes Hyperproliferation of Luminal Cells and Cooperates with HER2 Oncogene in Tumor Initiation: A Novel Prognostic Marker in Breast Cancer. Cancers 2023;15(4):1119 View
  14. Song X, Li J, Pietras R. Screening of Immune-Related Genes and Predicting the Immunotherapeutic Effects of Formononetin in Breast Cancer: A Bioinformatics Analysis. Evidence-Based Complementary and Alternative Medicine 2022;2022:1 View
  15. Chen W, Wang H, Mi S, Shao L, Xu Z, Xue M. ALKBH1 ‐mediated m 1 A demethylation of METTL3 mRNA promotes the metastasis of colorectal cancer by downregulating SMAD7 expression. Molecular Oncology 2023;17(2):344 View
  16. Shen C, Chang W, Chen Y, Weng C, Regmi P, Kier M, Su K, Chang G, Chen J, Chen Y, Yu S. Tissue Proteogenomic Landscape Reveals the Role of Uncharacterized SEL1L3 in Progression and Immunotherapy Response in Lung Adenocarcinoma. Journal of Proteome Research 2023;22(4):1056 View
  17. Petkevicius V, Thon C, Steponaitiene R, Skieceviciene J, Janciauskas D, Jechorek D, Malfertheiner P, Kupcinskas J, Link A. Differential Expression of Long Noncoding RNA HOTAIR in Intestinal Metaplasia and Gastric Cancer. Clinical and Translational Gastroenterology 2022;13(5):e00483 View
  18. Prieto‐Garcia C, Hartmann O, Reissland M, Braun F, Bozkurt S, Pahor N, Fuss C, Schirbel A, Schülein‐Völk C, Buchberger A, Calzado Canale M, Rosenfeldt M, Dikic I, Münch C, Diefenbacher M. USP28 enables oncogenic transformation of respiratory cells, and its inhibition potentiates molecular therapy targeting mutant EGFR, BRAF and PI3K. Molecular Oncology 2022;16(17):3082 View
  19. Zhao Y, Zuo J, Shen Y, Yan D, Chen J, Qi X. Identification of Novel Drugs Targeting Cell Cycle Regulators for the Treatment of High-Grade Serous Ovarian Cancer via Integrated Bioinformatics Analysis. Symmetry 2022;14(7):1403 View
  20. Zhang J, Li Y, Zou J, Lai C, Zeng T, Peng J, Zou W, Cao B, Liu D, Zhu L, Li H, Li Y. Comprehensive analysis of the glutathione S-transferase Mu (GSTM) gene family in ovarian cancer identifies prognostic and expression significance. Frontiers in Oncology 2022;12 View
  21. Qi Y, Zhang C, Wu D, Zhang Y, Zhao Y, Li W. Indole-3-Carbinol Stabilizes p53 to Induce miR-34a, Which Targets LDHA to Block Aerobic Glycolysis in Liver Cancer Cells. Pharmaceuticals 2022;15(10):1257 View
  22. Beltrán-Navarro Y, Reyes-Cruz G, Vázquez-Prado J. P-Rex1 Signaling Hub in Lower Grade Glioma Patients, Found by In Silico Data Mining, Correlates With Reduced Survival and Augmented Immune Tumor Microenvironment. Frontiers in Oncology 2022;12 View
  23. Gao S, Zhang H, Lai L, Zhang J, Li Y, Miao Z, Rahman S, Zhang H, Qian A, Zhang W. S100A10 might be a novel prognostic biomarker for head and neck squamous cell carcinoma based on bioinformatics analysis. Computers in Biology and Medicine 2022;149:106000 View
  24. Han M, Li Y, Guo Y, Zhu W, Jiang J. Integrative and Comprehensive Pan-Cancer Analysis of Lymphocyte-Specific Protein Tyrosine Kinase in Human Tumors. International Journal of Molecular Sciences 2022;23(22):13998 View
  25. Wang M, Qiu Z, Wang Y, Lian B, Bai J, Zhou Y, Ji H. Analysis of the expression and prognostic significance of DDK complex in Hepatocarcinoma. BMC Cancer 2023;23(1) View
  26. Criscuolo D, Avolio R, Parri M, Romano S, Chiarugi P, Matassa D, Esposito F. Decreased Levels of GSH Are Associated with Platinum Resistance in High-Grade Serous Ovarian Cancer. Antioxidants 2022;11(8):1544 View
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  28. Wang L, Zhao J, Zhu C, Yang K, Zhu L, Liu Y. Construction of a ceRNA Network and Comprehensive Analysis of lncRNA in Hepatocellular Carcinoma. Genes 2022;13(5):785 View
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  30. Liu K, Cui L, Li C, Tang C, Niu Y, Hao J, Bu Y, Chen B. Pan-cancer analysis of the prognostic and immunological role of ANLN: An onco-immunological biomarker. Frontiers in Genetics 2022;13 View
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  32. Stafford M, McKenna D. MiR-182 Is Upregulated in Prostate Cancer and Contributes to Tumor Progression by Targeting MITF. International Journal of Molecular Sciences 2023;24(3):1824 View
  33. Liu Y, Fang Y, Bao L, Wu F, Wang S, Hao S. Intercellular Communication Reveals Therapeutic Potential of Epithelial-Mesenchymal Transition in Triple-Negative Breast Cancer. Biomolecules 2022;12(10):1478 View
  34. Yadav N, Sunder R, Desai S, Dharavath B, Chandrani P, Godbole M, Dutt A. Progesterone modulates the DSCAM-AS1/miR-130a/ESR1 axis to suppress cell invasion and migration in breast cancer. Breast Cancer Research 2022;24(1) View
  35. Xu Y, Zhang M, Shi Q, Cheng X, Du R, Li C, Zhang Y. Identification of HOXB9 to predict prognosis of endometrial cancer based on comprehensive bioinformatics analysis. European Journal of Medical Research 2023;28(1) View
  36. Matassa D, Criscuolo D, Avolio R, Agliarulo I, Sarnataro D, Pacelli C, Scrima R, Colamatteo A, Matarese G, Capitanio N, Landriscina M, Esposito F. Regulation of mitochondrial complex III activity and assembly by TRAP1 in cancer cells. Cancer Cell International 2022;22(1) View
  37. Zhang X, Zhang Q, Liu G. Genome-wide analysis of the FOXA1 transcriptional regulatory network identifies super enhancer associated LncRNAs in tamoxifen resistance. Frontiers in Genetics 2022;13 View
  38. Sudha B, Swathi K, Suganya K, Poornima A, Senthil Kumar N, Sumathi S. Identification of Key Candidate Genes in the Progression of Cervical Cancer: An in Silico Analysis. Indian Journal of Gynecologic Oncology 2022;20(4) View
  39. Eid R, Soltan M, Eldeen M, Shati A, Dawood S, Eissa M, Zaki M, Algahtani M, Theyab A, Abdel-Daim M, Kim B. Assessment of RACGAP1 as a Prognostic and Immunological Biomarker in Multiple Human Tumors: A Multiomics Analysis. International Journal of Molecular Sciences 2022;23(22):14102 View
  40. Ji K, Dou W, Zhang N, Wen B, Zhong M, Zhang Q, Xu S, Zhou J, Liu J. Retinoic acid receptor gamma is required for proliferation of pancreatic cancer cells. Cell Biology International 2023;47(1):144 View
  41. Madgwick S, Luli S, Sellier H, Butterworth J, Leslie J, Moore A, Corbin E, Yemm A, Chiremba R, Tiniakos D, Oakley F, Perkins N, Hunter J. Claspin haploinsufficiency leads to defects in fertility, hyperplasia and an increased oncogenic potential. Biochemical Journal 2022;479(19):2115 View
  42. Benwell C, Johnson R, Taylor J, Price C, Robinson S. Endothelial VEGFR Coreceptors Neuropilin-1 and Neuropilin-2 Are Essential for Tumor Angiogenesis. Cancer Research Communications 2022;2(12):1626 View
  43. Huang P, Xia L, Guo Q, Huang C, Wang Z, Huang Y, Qin S, Leng W, Li D. Genome-wide association studies identify miRNA-194 as a prognostic biomarker for gastrointestinal cancer by targeting ATP6V1F, PPP1R14B, BTF3L4 and SLC7A5. Frontiers in Oncology 2022;12 View
  44. Yang Y, Qiu R, Zhao S, Shen L, Tang B, Weng Q, Xu Z, Zheng L, Chen W, Shu G, Wang Y, Zhao Z, Chen M, Ji J. SMYD3 associates with the NuRD (MTA1/2) complex to regulate transcription and promote proliferation and invasiveness in hepatocellular carcinoma cells. BMC Biology 2022;20(1) View
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  46. Liu Q, Xie R, Li Y. Pancancer Analysis of the Oncogenic and Prognostic Role of NOL7: A Potential Target for Carcinogenesis and Survival. International Journal of Molecular Sciences 2022;23(17):9611 View
  47. Ye S, Li S, Qin L, Zheng W, Liu B, Li X, Ren Z, Zhao H, Hu X, Ye N, Li G. GBP2 promotes clear cell renal cell carcinoma progression through immune infiltration and regulation of PD‑L1 expression via STAT1 signaling. Oncology Reports 2023;49(3) View
  48. Shi S, Chen H, Wang H, Wan J, Shi Y, Li J, Wang S, Shi J, Lv J, Wu T, Wang L, Sun F. Genome-wide CRISPR knockout screening identified G protein pathway suppressor 2 as a novel tumor suppressor for uveal melanoma metastasis. Journal of Cancer Research and Clinical Oncology 2022 View
  49. Wang S, Fu Y, Kuerban K, Liu J, Huang X, Pan D, Chen H, Zhu Y, Ye L. Discoidin domain receptor 1 is a potential target correlated with tumor invasion and immune infiltration in gastric cancer. Frontiers in Immunology 2022;13 View
  50. Liu X, Chipurupalli S, Jiang P, Tavasoli M, Yoo B, McPhee M, Mazinani S, Francia G, Kerbel R, Rosen K. ErbB2/Her2-dependent downregulation of a cell death-promoting protein BLNK in breast cancer cells is required for 3D breast tumor growth. Cell Death & Disease 2022;13(8) View
  51. Magallanes-Garza G, Santuario-Facio S, Lira-Albarrán S, Varela-Varela A, Cardona-Huerta S, Ruiz-Flores P, Haro-Santa-Cruz J, Perez-Paramo Y, Gomez-Macias G, Davila-Gonzalez D, Valero-Gomez J, Borrego-Soto G, Rojas-Martinez A, Ortiz-Lopez R, Li T. NUSAP1 and PCLAF (KIA0101) Downregulation by Neoadjuvant Therapy is Associated with Better Therapeutic Outcomes and Survival in Breast Cancer. Journal of Oncology 2022;2022:1 View
  52. Wang R, Bhatt A, Minden-Birkenmaier B, Travis O, Tiwari S, Jia H, Rosikiewicz W, Martinot O, Childs E, Loesch R, Tossou G, Jamieson S, Finkelstein D, Xu B, Labelle M. ZBTB18 restricts chromatin accessibility and prevents transcriptional adaptations that drive metastasis. Science Advances 2023;9(1) View
  53. Dwivedi K, Rajpal A, Rajpal S, Agarwal M, Kumar V, Kumar N. An explainable AI-driven biomarker discovery framework for Non-Small Cell Lung Cancer classification. Computers in Biology and Medicine 2023;153:106544 View
  54. Ko C, Chu T, Hsu C, Chen H, Huang S, Chang C, Tzou S, Chen T, Lin C, Shih P, Lin C, Chang C, Lee Y. Bioinformatics Analyses Identify the Therapeutic Potential of ST8SIA6 for Colon Cancer. Journal of Personalized Medicine 2022;12(3):401 View
  55. Chang Z, Duan Q, Yu C, Li D, Jiang H, Ge F, Xu G. Proteomics and Biochemical Analyses of Secreted Proteins Revealed a Novel Mechanism by Which ADAM12S Regulates the Migration of Gastric Cancer Cells. Journal of Proteome Research 2022;21(9):2160 View
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  57. Cai Y, He Q, Liu W, Liang Q, Peng B, Li J, Zhang W, Kang F, Hong Q, Yan Y, Peng J, Xu Z, Bai N. Comprehensive analysis of the potential cuproptosis-related biomarker LIAS that regulates prognosis and immunotherapy of pan-cancers. Frontiers in Oncology 2022;12 View
  58. Zhang X, O’Brien D, Zhang X, Hussain T. Investigation of Transcript Variant 6 of TPD52L2 as a Prognostic and Predictive Biomarker in Basal-Like MDA-MB-231 and MDA-MB-453 Cell Lines for Breast Cancer. Oxidative Medicine and Cellular Longevity 2022;2022:1 View
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